The time now is Second pass get the annotation in GTF format. There is some basic help available at this link: Find More Posts by karimhasanpur yahoo. I tried a couple and they seem to work. So, I want to analyze my data using iGenome files and compare with my previous results. 
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Illumina iGenomes Incomplete Data Files.
iGenomes index and annotation packages available for download – Cufflinks
The error message says "connection reset". They are not going to be as well integrated as iGenomes since you will need to make the aligner illhmina etc. Thanks for your time and consideration. Dear all, I have difficulties in downloading chicken files from iGenome site. Find More Posts by Bukowski.
Trouble downloading data from Illumina iGenomes - SEQanswers
I cannot download chicken files from iGenome. Could you or other members help me to solve this problem. Thanks in advance, Karim.
Illumina iGenomes annotation problems. These files do not have ensembl gene ids.
Second pass get the annotation in GTF format. Is anyone else finding that they can't download iGenomes data from the Illumina ftp site? Does anyone have these files to share with me? Find More Posts by anwesharry.
iGenomes index and annotation packages available for download
Find More Posts by GenoMax. I have no idea why this is the case. A couple of other options to try. Rochester NY Join Ibenome Send a private message to GenoMax. You are currently viewing the SEQanswers forums as a guest, which limits your access. Click here to register nowand join the discussion. Aberdeen, Scotland Join Date: Am I doing something wrong?
I spent some illumnia thinking their FTP site was broken - but it isn't. Dear Genomax, Many thanks for your advice. All times are GMT There is some basic help available at this link: Trouble downloading data from Illumina iGenomes Is anyone else finding that they can't download iGenomes data from the Illumina ftp site?
Other FTP sites seem to work fine from within the work firewall, it's just Illumina's I struggle with. I've tried through my browser chrome via the cufflinks website and via an ftp client with the password and username.
Trouble downloading data from Illumina iGenomes. One pass download the sequence.
The time now is I have downloaded reference genome and transcriptome from Ensembl: I have the same issue, however I think it's to do with the work firewall.
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